Example force of exposure parameters required (foe_pars) as an input for runserosim. foe_pars is a 3D array providing the force of exposure for each exposure ID, group and time. This foe_pars argument is for a simulation with 120 time steps and two different exposure events (dimension 3)
data(example_foe_pars)A 3 dimensional array containing the force of exposure at each time step for each exposure ID:
group dimension is 1 since no groups were specified in example_demography. Since there are no specified groups, all individuals are under the same force of exposure parameter
time step dimension is 120 since there are 120 time steps in the simulation
exposure ID dimension for 2 exposure types
Other example_data:
example_biomarker_map_numeric,
example_biomarker_map,
example_biomarker_states_wide,
example_biomarker_states,
example_demography,
example_exposure_force,
example_exposure_probabilities,
example_immune_histories_wide,
example_immune_histories,
example_model_pars_biphasic,
example_model_pars_numeric,
example_model_pars_typhoid,
example_model_pars,
example_observed_biomarker_states